All functions |
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Biomass and soil data from FluxNet sites |
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BADM_IC_process |
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Clean_Tucson |
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EPA_ecoregion_finder |
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Extract ISCN SOC initial conditions from existing ISCN database. |
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InventoryGrowthFusion |
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InventoryGrowthFusionDiagnostics |
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Read.IC.info.BADM |
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Read_Tucson |
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Prepare Soilgrids SoilC data for the SDA workflow. |
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Format ring & plot data for JAGA |
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cohort2pool |
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DataONE download |
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Download CDS soil moisture data for the SDA workflow. |
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Download NEON Soil Water Content and Soil Salinity data by date and site name |
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download_packages |
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Sampling/ensemble module |
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extract.stringCode |
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extract_FIA |
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extract_NEON_veg |
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Extract CDS soil moisture data for the SDA workflow. |
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Extract soil data from gssurgo |
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Extract soil data from the gridpoint closest to a location |
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extract_veg |
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Create pss/css files based on data in the fia database |
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format_identifier |
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from.Tag |
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from.TreeCode |
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This function queries the gSSURGO database for a series of map unit keys |
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Retrieve attribute information from a vector or raster layer |
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get.soil |
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get_resource_map |
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Load/extract + match species module |
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ic_process |
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id_resolveable |
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Soil organic carbon (SOC) density based on eco-region level 2 code from the ISCN database. |
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load_veg |
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matchInventoryRings |
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match_pft |
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Match BETY species ID. |
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Convert a matric potential to a soil moisture |
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netcdf.writer.BADAM |
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parse.MatrixNames |
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partition_roots |
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plot2AGB |
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pool_ic_list2netcdf |
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pool_ic_netcdf2list |
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prepare_pools |
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Match species to PFTs + veg2model module |
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sample_ic |
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This function determines the soil class number based on the fraction of sand, clay, and silt |
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Convert shapefile to KML |
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Get standard units for a soil variable |
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Save soil texture & parameters in PEcAn standard netCDF CF |
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Default parameters for calculating soil properties from sand & clay content |
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Estimate soil parameters from texture class or sand/silt/clay |
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Module for managing soil texture extraction |
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soilgrids_soilC_extract |
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Function to subset and clip a GIS vector or raster layer by a bounding box or clip/subset layer (e.g. shapefile/KML) |
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to.Tag |
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to.TreeCode |
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write_ic |
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write_veg |