Load/extract + match species module

get_veg_module(
  input_veg,
  outfolder,
  start_date,
  end_date,
  dbparms,
  new_site,
  host,
  machine_host,
  overwrite
)

Arguments

input_veg: list, this is a sublist of settings$run$inputs that has info about source, id, metadata of the requested IC file
outfolder: path to where the processed files will be written
start_date: date in "YYYY-MM-DD" format, in case of source==FIA it's the settings$run$start.date, otherwise start_date of the IC file in DB
end_date: date in "YYYY-MM-DD" format, in case of source==FIA it's the settings$run$end.date, otherwise end_date of the IC file in DB
dbparms: list, settings$database info reqired for opening a connection to DB
new_site: data frame, id/lat/lon/name info about the site
host: list, host info as in settings$host, host$name forced to be "localhost" upstream
machine_host: local machine hostname, e.g. "pecan2.bu.edu"
overwrite: logical flag for convert_input

Istem Fer