Package index • PEcAn.uncertainty

All functions
`ensemble.filename()`	Generate ensemble filenames
`ensemble.ts()`	Plots an ensemble time-series from PEcAn for the selected target variable
`flux.uncertainty()`	Calculate parameters for heteroskedastic flux uncertainty
`get.change()`	Get delta between sequential flux datapoints
`get.coef.var()`	Get coefficient of variance
`get.elasticity()`	Generic function for the elasticity
`get.ensemble.samples()`	Get Ensemble Samples
`get.gi.phii()`	Get g_i(phi_i)
`get.parameter.samples()`	Convert priors / MCMC samples to chains that can be sampled for model parameters
`get.results()`	Reads model output and runs sensitivity and ensemble analyses
`get.sensitivity()`	Calculate the sensitivity of a function at the median
`input.ens.gen()`	Function for generating samples based on sampling method, parent or etc
`kurtosis()`	Calculates the excess kurtosis of a vector
`plot_flux_uncertainty()`	Plot fit for heteroskedastic flux uncertainty
`plot_sensitivities()`	Plot functions and quantiles used in sensitivity analysis
`plot_sensitivity()`	Sensitivity plot
`plot_variance_decomposition()`	Variance Decomposition Plots
`read.ameriflux.L2()`	Read Ameriflux L2 Data
`read.ensemble.output()`	Read ensemble output
`read.ensemble.ts()`	Reads ensemble time-series from PEcAn for the selected target variable
`read.sa.output()`	Read Sensitivity Analysis output
`run.ensemble.analysis()`	run ensemble.analysis
`run.sensitivity.analysis()`	run sensitivity.analysis
`runModule.get.results()`	Apply get.results to each of a list of settings
`sa.splinefun()`	Spline estimate of univariate relationship between parameter value and model output
`sd.var()`	Calculates the standard deviation of the variance estimate
`sensitivity.analysis()`	Performs univariate sensitivity analysis and variance decomposition
`sensitivity.filename()`	Generate sensitivity analysis filenames
`spline.ensemble()`	Spline Ensemble
`spline.truncate()`	Truncate spline at zero if...
`variance.stats()`	variance statistics
`write.ensemble.configs()`	Write ensemble config files
`write.sa.configs()`	Write sensitivity analysis config files

Reference

All functions