qsub_parallel

qsub_parallel

qsub_parallel(
  settings,
  files = NULL,
  prefix = "sipnet.out",
  sleep = 10,
  hybrid = TRUE
)

Arguments

settings

pecan settings object

files

allow submit jobs based on job.sh file paths.

prefix

used for detecting if jobs are completed or not.

sleep

time (in second) that we wait each time for the jobs to be completed.

hybrid

A Boolean argument decide the way of detecting job completion. If it's TRUE then we will detect both the outputted files and job ids on the server. If it's FALSE then we will only detect the job ids on the server.

Author

Dongchen Zhang

Examples

if (FALSE) { # \dontrun{
  qsub_parallel(settings)
} # }